BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F06SP1|AL425898
(770 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1436 0.0
>3x_Contig1461
Length = 5478
Score = 1436 bits (719), Expect = 0.0
Identities = 756/771 (98%), Gaps = 2/771 (0%)
Strand = Plus / Minus
Query: 2 agaagaataatactgcttgtgtagatgtacagtagctcatgttgtaatgctgctgctctt 61
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3129 agaagaataatactgctcgtgtagatgtacagtagctcatgttgtaatgctgctgctctt 3070
Query: 62 atttcatgcaaggaataatgtggcagaacagtgttgaattttaggtctgaaaggagagag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3069 atttcatgcaaggaataatgtggcagaacagtgttgaattttaggtctgaaaggagagag 3010
Query: 122 tgccagaygaatcaccatctgtattttttttatttgttttttttattttcttctcaacca 181
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3009 tgccagatgaatcaccatctgtattttttttatttgttttttttattttcttctcaacca 2950
Query: 182 gtgggattatcctccttaacaggagtgaaaaaataaaaagggaaacacaaaaacgaaaat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2949 gtgggattatcctccttaacaggagtgaaaaaataaaaagggaaacacaaaaacgaaaat 2890
Query: 242 cgagatttgtatataaaggggagaatcgttgatgaaaaagaaggggaagaaaaaaagcta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 cgagatttgtatataaaggggagaatcgttgatgaaaaagaaggggaagaaaaaaagcta 2830
Query: 302 aaagtgcgaatkttaccatttgaaaaaatactgaaaaaaataacagagggtattgagaag 361
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2829 aaagtgcgaattttaccatttgaaaaaatactgaaaaaaataacagagggtattgagaag 2770
Query: 362 atgaaaaaaatgaatgcatttttgaaatatag-aacgtgagggcyaatagaaagaagacc 420
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 2769 atgaaaaaaatgaatgcatttttgaaatatagaaacgtgagggctaatagaaagaagacc 2710
Query: 421 acgggtgagaaaaataggccgggaggtacttcatgcgaaagcagttgaagacgaatcgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2709 acgggtgagaaaaataggccgggaggtacttcatgcgaaagcagttgaagacgaatcgga 2650
Query: 481 aagagtttggaaacaaacttgagtvagabttggatgtagtcgttcgtcgaacagactatg 540
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2649 aagagtttggaaacaaacttgagtaagatttggatgtagtcgttcgtcgaacagactatg 2590
Query: 541 gcctcgtctcgcggtggagagagtttctaggtgatcgtcagakcaagcct-gggccctat 599
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 2589 gcctcgtctcgcggtggagagagtttctaggtgatcgtcagatcaagcctggggccctat 2530
Query: 600 acagcgcggtgacatgggtgtgtgcagcatcgaaagatgybatagtacgcctgaacagtc 659
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 2529 acagcgcggtgacatgggtgtgtgcagcatcgaaagatgctgcaagacgcctgaacagtc 2470
Query: 660 tcgtcatggacatctagcgattccattggcgagcagtggaggatttggtggattactagc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2469 tcgtcatggacatctagcgattccattggcgagcagtggaggatttggtggattactagc 2410
Query: 720 caatggcaatccaaaccaaagaaaccatatttgggggaatgccttacagaa 770
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2409 caatggcaatccaaaccaaagaaaccatatttgggggaatgccttacagaa 2359
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8002
Number of Sequences: 1807
Number of extensions: 8002
Number of successful extensions: 359
Number of sequences better than 1.0e-20: 1
length of query: 770
length of database: 10,358,551
effective HSP length: 16
effective length of query: 754
effective length of database: 10,329,639
effective search space: 7788547806
effective search space used: 7788547806
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)